Gene detail information of Glyur001029s00027002.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21200.12.00E-75gibberellin 2-oxidase 8
NRKHN27968.12.50E-146Gibberellin 2-beta-dioxygenase 8 [Glycine soja]
COGYP_004572412.17.00E-23oxidoreductase [Microlunatus phosphovorus NM-1]
Swissprottr|O49561|G2OX8_ARATH1.00E-91Gibberellin 2-beta-dioxygenase 8
trEMBLtr|K7LW84|K7LW84_SOYBN9.00E-147Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34175.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010297809480131+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04125E1.14.11.13 EC:1.14.11.13 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001029s00027002.1PF14226.1DIOX_N411316.30E-17
Glyur001029s00027002.1PF03171.152OG-FeII_Oxy1462413.80E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.345
SRR1783600control2.043
SRR1783602moderate drought stress3.783
SRR1811619moderate drought stress4.131

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.452
DRR006520Root Summer glycyrrhizin high producing strain0.269
DRR006521Root Winter glycyrrhizin high producing strain1.770
DRR006522Root Winter glycyrrhizin high producing strain1.506
DRR006523Root Summer glycyrrhizin low producing strain1.192
DRR006524Root Summer glycyrrhizin low producing strain1.114
DRR006525Leaf Summer glycyrrhizin high producing strain0.215
DRR006526Leaf Summer glycyrrhizin high producing strain0.109

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.426
SRR2868004Drought Stress(Tissue:root)20.961
SRR2967015Control (Tissue:root)19.671

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.077
SRR9715740Leave0.000
SRR9715741Leave0.113
SRR9715739Root0.650
SRR9715742Root0.885
SRR9715743Root0.342

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.551
SRR8400027Control-Root43.939

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved