Gene detail information of Glyur001030s00028195.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G56370.10Leucine-rich repeat protein kinase family protein
NRNP_001239730.10probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like precursor [Glycine max]
COGYP_004775215.19.00E-54RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LRT1|Y3804_ARATH0Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 (Precursor)
trEMBLtr|I1KB74|I1KB74_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G14770.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010302089125625+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001030s00028195.1PF08263.7LRRNT_231733.20E-09
Glyur001030s00028195.1PF13855.1LRR_81031616.50E-08
Glyur001030s00028195.1PF00560.28LRR_12002180.9
Glyur001030s00028195.1PF00560.28LRR_12232451.1
Glyur001030s00028195.1PF13855.1LRR_82953532.00E-08
Glyur001030s00028195.1PF12799.2LRR_43964317.40E-07
Glyur001030s00028195.1PF13855.1LRR_84685271.30E-08
Glyur001030s00028195.1PF00560.28LRR_15405601.1
Glyur001030s00028195.1PF07714.12Pkinase_Tyr6979642.90E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.243
SRR1783600control10.125
SRR1783602moderate drought stress6.970
SRR1811619moderate drought stress6.633

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.825
DRR006520Root Summer glycyrrhizin high producing strain10.529
DRR006521Root Winter glycyrrhizin high producing strain0.368
DRR006522Root Winter glycyrrhizin high producing strain0.303
DRR006523Root Summer glycyrrhizin low producing strain6.229
DRR006524Root Summer glycyrrhizin low producing strain5.686
DRR006525Leaf Summer glycyrrhizin high producing strain5.430
DRR006526Leaf Summer glycyrrhizin high producing strain5.120

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.216
SRR2868004Drought Stress(Tissue:root)32.429
SRR2967015Control (Tissue:root)31.763

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.789
SRR9715740Leave2.025
SRR9715741Leave2.562
SRR9715739Root10.268
SRR9715742Root11.686
SRR9715743Root10.937

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.744
SRR8749028MeJA induced 9h1.922
SRR8749029MeJA induced 9h1.489
SRR8749030Uninduced0.154
SRR8749031Uninduced0.039
SRR8749032Uninduced0.195

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.735
SRR8400027Control-Root29.472

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved