Gene detail information of Glyur001030s00028207.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40620.13.00E-62Basic-leucine zipper (bZIP) transcription factor family protein
NRXP_004502831.10PREDICTED: transcription factor RF2b-like isoform X1 [Cicer arietinum]
Swissprottr|Q6S4P4|RF2B_ORYSJ1.00E-72Transcription factor RF2b
trEMBLtr|A0A072V2G2|A0A072V2G2_MEDTR0BZIP transcription factor {ECO:0000313|EMBL:KEH35548.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010306318266361+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP
EAR motif-containing ProteinsbZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001030s00028207.1PF00170.16bZIP_11251829.60E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.162
SRR1783600control13.484
SRR1783602moderate drought stress8.753
SRR1811619moderate drought stress8.788

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.847
DRR006520Root Summer glycyrrhizin high producing strain4.433
DRR006521Root Winter glycyrrhizin high producing strain4.946
DRR006522Root Winter glycyrrhizin high producing strain4.765
DRR006523Root Summer glycyrrhizin low producing strain2.879
DRR006524Root Summer glycyrrhizin low producing strain2.989
DRR006525Leaf Summer glycyrrhizin high producing strain3.519
DRR006526Leaf Summer glycyrrhizin high producing strain3.445

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.742
SRR2868004Drought Stress(Tissue:root)10.224
SRR2967015Control (Tissue:root)12.045

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.763
SRR9715740Leave1.670
SRR9715741Leave1.921
SRR9715739Root7.597
SRR9715742Root6.113
SRR9715743Root6.277

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.365
SRR8749028MeJA induced 9h6.718
SRR8749029MeJA induced 9h7.037
SRR8749030Uninduced2.892
SRR8749031Uninduced1.808
SRR8749032Uninduced1.780

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.870
SRR8400027Control-Root13.847

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved