Gene detail information of Glyur001032s00027426.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56350.10Pyruvate kinase family protein
NRXP_004149636.10PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cucumis sativus]
COGYP_002314869.19.00E-123pyruvate kinase [Anoxybacillus flavithermus WK1]
Swissprottr|Q42954|KPYC_TOBAC0Pyruvate kinase, cytosolic isozyme
trEMBLtr|A0A0A0L1N0|A0A0A0L1N0_CUCSA0Uncharacterized protein {ECO:0000313|EMBL:KGN54016.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010322991539679+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00873PK, pyk EC:2.7.1.40 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pyruvate metabolismmap00620
Purine metabolismmap00230
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230
Viral carcinogenesismap05203
Type II diabetes mellitusmap04930


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0000287  magnesium ion binding

GO:0003824  catalytic activity

GO:0004743  pyruvate kinase activity

GO:0030955  potassium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001032s00027426.1PF00224.16PK123493.20E-146
Glyur001032s00027426.1PF02887.11PK_C3664931.90E-21
Glyur001032s00027426.1PF00224.16PK5068602.40E-144
Glyur001032s00027426.1PF02887.11PK_C87710045.90E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control57.879
SRR1783600control57.235
SRR1783602moderate drought stress48.526
SRR1811619moderate drought stress48.455

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.487
DRR006520Root Summer glycyrrhizin high producing strain60.062
DRR006521Root Winter glycyrrhizin high producing strain72.455
DRR006522Root Winter glycyrrhizin high producing strain70.128
DRR006523Root Summer glycyrrhizin low producing strain55.521
DRR006524Root Summer glycyrrhizin low producing strain56.038
DRR006525Leaf Summer glycyrrhizin high producing strain39.891
DRR006526Leaf Summer glycyrrhizin high producing strain39.862

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)108.737
SRR2868004Drought Stress(Tissue:root)89.135
SRR2967015Control (Tissue:root)81.439

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.163
SRR9715740Leave34.395
SRR9715741Leave37.515
SRR9715739Root62.770
SRR9715742Root70.537
SRR9715743Root75.391

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h107.452
SRR8749028MeJA induced 9h69.541
SRR8749029MeJA induced 9h69.926
SRR8749030Uninduced50.139
SRR8749031Uninduced47.453
SRR8749032Uninduced46.370

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root92.254
SRR8400027Control-Root86.871

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved