Gene detail information of Glyur001033s00031540.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23000.14.00E-131CBL-interacting protein kinase 7
NRKEH41023.10CBL-interacting kinase [Medicago truncatula]
COGYP_003101494.14.00E-30serine/threonine protein kinase [Actinosynnema mirum DSM 43827]
Swissprottr|Q9XIW0|CIPK7_ARATH2.00E-167CBL-interacting serine/threonine-protein kinase 7
trEMBLtr|A0A072VHV8|A0A072VHV8_MEDTR0CBL-interacting kinase {ECO:0000313|EMBL:KEH41023.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010334285345500-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0003676  nucleic acid binding

GO:0004523  RNA-DNA hybrid ribonuclease activity

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001033s00031540.1PF00069.20Pkinase292871.20E-66
Glyur001033s00031540.1PF03822.9NAF3213762.60E-20
Glyur001033s00031540.1PF13456.1RVT_35005828.00E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control199.621
SRR1783600control200.884
SRR1783602moderate drought stress556.761
SRR1811619moderate drought stress552.747

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain414.721
DRR006520Root Summer glycyrrhizin high producing strain410.648
DRR006521Root Winter glycyrrhizin high producing strain157.551
DRR006522Root Winter glycyrrhizin high producing strain152.781
DRR006523Root Summer glycyrrhizin low producing strain553.247
DRR006524Root Summer glycyrrhizin low producing strain553.964
DRR006525Leaf Summer glycyrrhizin high producing strain18.659
DRR006526Leaf Summer glycyrrhizin high producing strain18.952

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)143.442
SRR2868004Drought Stress(Tissue:root)140.282
SRR2967015Control (Tissue:root)184.864

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.962
SRR9715740Leave37.903
SRR9715741Leave64.270
SRR9715739Root893.213
SRR9715742Root649.786
SRR9715743Root678.044

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h179.817
SRR8749028MeJA induced 9h164.022
SRR8749029MeJA induced 9h88.856
SRR8749030Uninduced232.657
SRR8749031Uninduced35.097
SRR8749032Uninduced149.569

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root102.784
SRR8400027Control-Root130.438

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved