Gene detail information of Glyur001034s00029008.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26320.1 | 4.00E-98 | cytochrome P450, family 71, subfamily B, polypeptide 36 |
| NR | XP_003600339.1 | 0 | Cytochrome P450 [Medicago truncatula] |
| COG | YP_007126612.1 | 2.00E-29 | Unspecific monooxygenase [Gloeocapsa sp. PCC 7428] |
| Swissprot | tr|O22307|C71DB_LOTJA | 0 | Cytochrome P450 71D11 (Fragment) |
| trEMBL | tr|G7IV02|G7IV02_MEDTR | 0 | Cytochrome P450 family 71 protein {ECO:0000313|EMBL:AES70590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01034 | 21418 | 23273 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B36 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001034s00029008.1 | PF00067.17 | p450 | 41 | 471 | 1.90E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 1.397 |
| SRR1811619 | moderate drought stress | 1.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.367 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.272 |
| SRR2967015 | Control (Tissue:root) | 2.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.668 |
| SRR9715740 | Leave | 1.157 |
| SRR9715741 | Leave | 0.953 |
| SRR9715739 | Root | 0.967 |
| SRR9715742 | Root | 1.399 |
| SRR9715743 | Root | 1.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.097 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.589 |
| SRR8400027 | Control-Root | 2.840 |