Gene detail information of Glyur001034s00029011.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G55920.16.00E-109serine acetyltransferase 2;1
NRXP_004506688.10PREDICTED: serine acetyltransferase 3, mitochondrial-like [Cicer arietinum]
COGNP_273604.13.00E-77serine acetyltransferase [Neisseria meningitidis MC58]
Swissprottr|Q42588|SAT1_ARATH2.00E-145Serine acetyltransferase 1, chloroplastic
trEMBLtr|V7BNI1|V7BNI1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW18610.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010343423635384-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00640cysE EC:2.3.1.30 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270
Biofilm formation - Vibrio choleraemap05111


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0009001  serine O-acetyltransferase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001034s00029011.1PF06426.9SATase_N1182206.00E-31
Glyur001034s00029011.1PF00132.19Hexapep2923263.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control79.076
SRR1783600control78.813
SRR1783602moderate drought stress46.633
SRR1811619moderate drought stress46.031

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.523
DRR006520Root Summer glycyrrhizin high producing strain9.595
DRR006521Root Winter glycyrrhizin high producing strain57.108
DRR006522Root Winter glycyrrhizin high producing strain55.652
DRR006523Root Summer glycyrrhizin low producing strain70.060
DRR006524Root Summer glycyrrhizin low producing strain70.595
DRR006525Leaf Summer glycyrrhizin high producing strain33.705
DRR006526Leaf Summer glycyrrhizin high producing strain33.487

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.850
SRR2868004Drought Stress(Tissue:root)112.234
SRR2967015Control (Tissue:root)59.886

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.877
SRR9715740Leave48.803
SRR9715741Leave61.713
SRR9715739Root28.240
SRR9715742Root19.492
SRR9715743Root20.417

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h108.344
SRR8749028MeJA induced 9h224.054
SRR8749029MeJA induced 9h50.544
SRR8749030Uninduced25.329
SRR8749031Uninduced57.006
SRR8749032Uninduced31.981

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root96.134
SRR8400027Control-Root76.344

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved