Gene detail information of Glyur001036s00023779.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78580.10trehalose-6-phosphate synthase
NRXP_003545692.10PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Glycine max]
COGYP_006545085.13.00E-128alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q9SYM4|TPS1_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
trEMBLtr|K7MCQ5|K7MCQ5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G27480.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010368078992823-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001036s00023779.1PF00982.16Glyco_transf_201955603.50E-137
Glyur001036s00023779.1PF00982.16Glyco_transf_205656301.70E-19
Glyur001036s00023779.1PF02358.11Trehalose_PPase6698836.10E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.266
SRR1783600control22.313
SRR1783602moderate drought stress23.756
SRR1811619moderate drought stress23.493

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.324
DRR006520Root Summer glycyrrhizin high producing strain17.040
DRR006521Root Winter glycyrrhizin high producing strain39.661
DRR006522Root Winter glycyrrhizin high producing strain38.518
DRR006523Root Summer glycyrrhizin low producing strain16.524
DRR006524Root Summer glycyrrhizin low producing strain16.530
DRR006525Leaf Summer glycyrrhizin high producing strain12.337
DRR006526Leaf Summer glycyrrhizin high producing strain12.195

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.334
SRR2868004Drought Stress(Tissue:root)19.646
SRR2967015Control (Tissue:root)26.568

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.012
SRR9715740Leave9.054
SRR9715741Leave8.610
SRR9715739Root2.003
SRR9715742Root22.481
SRR9715743Root18.735

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.197
SRR8749028MeJA induced 9h2.846
SRR8749029MeJA induced 9h2.070
SRR8749030Uninduced1.433
SRR8749031Uninduced0.862
SRR8749032Uninduced1.677

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.239
SRR8400027Control-Root26.294

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved