Gene detail information of Glyur001043s00031420.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G09680.21.00E-59reduced lateral root formation
NRXP_004513673.16.52E-107PREDICTED: cytochrome b5 reductase 4-like [Cicer arietinum]
COGYP_008870122.13.00E-07soluble cytochrome b558 [candidate division WWE3 bacterium RAAC2_WWE3_1]
Swissprottr|Q9LXD1|RLF_ARATH8.00E-75Cytochrome b5 domain-containing protein RLF {ECO:0000305}
trEMBLtr|I3S1V2|I3S1V2_LOTJA2.00E-106Uncharacterized protein {ECO:0000313|EMBL:AFK34244.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010436329566200-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00326E1.6.2.2 EC:1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0020037  heme binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001043s00031420.1PF00173.23Cyt-b51552361.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.200
SRR1783600control24.611
SRR1783602moderate drought stress21.001
SRR1811619moderate drought stress20.722

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.843
DRR006520Root Summer glycyrrhizin high producing strain38.338
DRR006521Root Winter glycyrrhizin high producing strain59.706
DRR006522Root Winter glycyrrhizin high producing strain59.632
DRR006523Root Summer glycyrrhizin low producing strain74.397
DRR006524Root Summer glycyrrhizin low producing strain72.909
DRR006525Leaf Summer glycyrrhizin high producing strain28.474
DRR006526Leaf Summer glycyrrhizin high producing strain28.136

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.953
SRR2868004Drought Stress(Tissue:root)52.786
SRR2967015Control (Tissue:root)40.405

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave80.296
SRR9715740Leave75.429
SRR9715741Leave91.985
SRR9715739Root12.243
SRR9715742Root41.682
SRR9715743Root36.588

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h113.828
SRR8749028MeJA induced 9h109.365
SRR8749029MeJA induced 9h125.377
SRR8749030Uninduced78.657
SRR8749031Uninduced127.960
SRR8749032Uninduced87.185

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.160
SRR8400027Control-Root86.293

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved