Gene detail information of Glyur001046s00037753.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16670.12.00E-110Protein kinase superfamily protein
NRKEH19566.10receptor-like kinase [Medicago truncatula]
COGYP_001875818.18.00E-21serine/threonine protein kinase [Elusimicrobium minutum Pei191]
Swissprottr|C0LGH3|Y5614_ARATH2.00E-87Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor)
trEMBLtr|A0A072TQR8|A0A072TQR8_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH19566.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0104625109550-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001046s00037753.1PF07714.12Pkinase_Tyr1472021.10E-08
Glyur001046s00037753.1PF00069.20Pkinase2053166.30E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.141
SRR1783600control2.154
SRR1783602moderate drought stress2.687
SRR1811619moderate drought stress2.668

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.585
DRR006520Root Summer glycyrrhizin high producing strain1.654
DRR006521Root Winter glycyrrhizin high producing strain1.607
DRR006522Root Winter glycyrrhizin high producing strain1.349
DRR006523Root Summer glycyrrhizin low producing strain1.353
DRR006524Root Summer glycyrrhizin low producing strain1.337
DRR006525Leaf Summer glycyrrhizin high producing strain2.772
DRR006526Leaf Summer glycyrrhizin high producing strain2.724

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.123
SRR2868004Drought Stress(Tissue:root)7.802
SRR2967015Control (Tissue:root)9.066

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.608
SRR9715740Leave6.058
SRR9715741Leave8.581
SRR9715739Root0.741
SRR9715742Root3.813
SRR9715743Root2.518

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.358
SRR8749028MeJA induced 9h9.549
SRR8749029MeJA induced 9h5.014
SRR8749030Uninduced23.109
SRR8749031Uninduced42.444
SRR8749032Uninduced10.795

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.527
SRR8400027Control-Root5.025

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved