Gene detail information of Glyur001048s00031767.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25230.10rotamase FKBP 1
NRXP_004492269.10PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like isoform X1 [Cicer arietinum]
COGYP_007069185.12.00E-35Peptidylprolyl isomerase [Calothrix sp. PCC 7507]
Swissprottr|Q38931|FKB62_ARATH0Peptidyl-prolyl cis-trans isomerase FKBP62
trEMBLtr|I1KZ20|I1KZ20_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G46090.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010483300739623+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09571FKBP4_5 EC:5.2.1.8 Estrogen signaling pathway map04915


Gene Ontology

biological_process

GO:0006457  protein folding


molecular_function

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001048s00031767.1PF00254.23FKBP_C471378.20E-34
Glyur001048s00031767.1PF00254.23FKBP_C1632544.60E-16
Glyur001048s00031767.1PF00254.23FKBP_C2813749.30E-20
Glyur001048s00031767.1PF13414.1TPR_114505082.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control103.136
SRR1783600control103.128
SRR1783602moderate drought stress89.710
SRR1811619moderate drought stress89.597

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain129.403
DRR006520Root Summer glycyrrhizin high producing strain126.558
DRR006521Root Winter glycyrrhizin high producing strain73.097
DRR006522Root Winter glycyrrhizin high producing strain69.795
DRR006523Root Summer glycyrrhizin low producing strain137.787
DRR006524Root Summer glycyrrhizin low producing strain138.090
DRR006525Leaf Summer glycyrrhizin high producing strain69.280
DRR006526Leaf Summer glycyrrhizin high producing strain68.932

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)195.388
SRR2868004Drought Stress(Tissue:root)174.674
SRR2967015Control (Tissue:root)164.743

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave109.283
SRR9715740Leave142.133
SRR9715741Leave160.114
SRR9715739Root8.290
SRR9715742Root76.569
SRR9715743Root63.406

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h114.740
SRR8749028MeJA induced 9h101.432
SRR8749029MeJA induced 9h85.392
SRR8749030Uninduced59.287
SRR8749031Uninduced56.582
SRR8749032Uninduced54.871

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root183.507
SRR8400027Control-Root165.905

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved