Gene detail information of Glyur001052s00025685.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00720.10shaggy-like protein kinase 32
NRBAD95891.10Ser/Thr protein kinase [Lotus japonicus]
COGYP_008149401.12.00E-18hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|Q96287|KSG8_ARATH0Shaggy-related protein kinase theta
trEMBLtr|Q53VM1|Q53VM1_LOTJA0Ser/Thr protein kinase {ECO:0000313|EMBL:BAD95891.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010528551590142+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001052s00025685.1PF00069.20Pkinase1444443.20E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.009
SRR1783600control9.168
SRR1783602moderate drought stress10.333
SRR1811619moderate drought stress10.166

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.818
DRR006520Root Summer glycyrrhizin high producing strain6.486
DRR006521Root Winter glycyrrhizin high producing strain14.931
DRR006522Root Winter glycyrrhizin high producing strain14.738
DRR006523Root Summer glycyrrhizin low producing strain11.155
DRR006524Root Summer glycyrrhizin low producing strain11.166
DRR006525Leaf Summer glycyrrhizin high producing strain5.264
DRR006526Leaf Summer glycyrrhizin high producing strain5.341

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.218
SRR2868004Drought Stress(Tissue:root)13.983
SRR2967015Control (Tissue:root)11.855

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.809
SRR9715740Leave9.897
SRR9715741Leave13.509
SRR9715739Root2.221
SRR9715742Root7.924
SRR9715743Root7.805

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.529
SRR8749028MeJA induced 9h11.791
SRR8749029MeJA induced 9h11.685
SRR8749030Uninduced25.417
SRR8749031Uninduced36.488
SRR8749032Uninduced34.385

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.717
SRR8400027Control-Root18.842

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved