Gene detail information of Glyur001053s00027287.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G21170.13.00E-136triosephosphate isomerase
NRKEH24057.10triosephosphate isomerase [Medicago truncatula]
COGYP_006216753.13.00E-71triosephosphate isomerase [Providencia stuartii MRSN 2154]
Swissprottr|Q9SKP6|TPIC_ARATH0Triosephosphate isomerase, chloroplastic (Precursor)
trEMBLtr|A0A072U2W1|A0A072U2W1_MEDTR0Triosephosphate isomerase {ECO:0000256|RuleBase:RU000517}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010532256726855+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01803TPI, tpiA EC:5.3.1.1 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Fructose and mannose metabolismmap00051
Inositol phosphate metabolismmap00562
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004807  triose-phosphate isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001053s00027287.1PF00121.13TIM663045.00E-90


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control184.535
SRR1783600control185.251
SRR1783602moderate drought stress142.411
SRR1811619moderate drought stress141.014

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain158.058
DRR006520Root Summer glycyrrhizin high producing strain156.521
DRR006521Root Winter glycyrrhizin high producing strain48.288
DRR006522Root Winter glycyrrhizin high producing strain46.654
DRR006523Root Summer glycyrrhizin low producing strain106.811
DRR006524Root Summer glycyrrhizin low producing strain107.988
DRR006525Leaf Summer glycyrrhizin high producing strain249.927
DRR006526Leaf Summer glycyrrhizin high producing strain248.080

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)234.248
SRR2868004Drought Stress(Tissue:root)144.156
SRR2967015Control (Tissue:root)123.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave394.122
SRR9715740Leave426.504
SRR9715741Leave321.916
SRR9715739Root157.693
SRR9715742Root147.576
SRR9715743Root152.216

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h199.840
SRR8749028MeJA induced 9h183.673
SRR8749029MeJA induced 9h236.317
SRR8749030Uninduced155.864
SRR8749031Uninduced129.699
SRR8749032Uninduced155.291

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root171.031
SRR8400027Control-Root167.872

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved