Gene detail information of Glyur001058s00023536.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47340.10glutamine-dependent asparagine synthase 1
NRAAB81011.10asparagine synthetase [Medicago sativa]
COGYP_004737172.10asparagine synthase [Zobellia galactanivorans]
Swissprottr|P49093|ASNS2_LOTJA0Asparagine synthetase [glutamine-hydrolyzing] 2
trEMBLtr|O24483|O24483_MEDSA0Asparagine synthetase {ECO:0000256|PIRNR:PIRNR001589}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010587222276895+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01953asnB, ASNS EC:6.3.5.4 Alanine, aspartate and glutamate metabolism map00250


Gene Ontology

biological_process

GO:0006529  asparagine biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0004066  asparagine synthase (glutamine-hydrolyzing) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001058s00023536.1PF13537.1GATase_7391561.10E-36
Glyur001058s00023536.1PF00733.16Asn_synthase2014352.60E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.950
SRR1783600control35.093
SRR1783602moderate drought stress115.504
SRR1811619moderate drought stress114.582

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain79.459
DRR006520Root Summer glycyrrhizin high producing strain79.970
DRR006521Root Winter glycyrrhizin high producing strain7.878
DRR006522Root Winter glycyrrhizin high producing strain7.672
DRR006523Root Summer glycyrrhizin low producing strain26.582
DRR006524Root Summer glycyrrhizin low producing strain26.719
DRR006525Leaf Summer glycyrrhizin high producing strain5.642
DRR006526Leaf Summer glycyrrhizin high producing strain5.867

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)258.786
SRR2868004Drought Stress(Tissue:root)404.673
SRR2967015Control (Tissue:root)670.842

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.762
SRR9715740Leave5.496
SRR9715741Leave11.072
SRR9715739Root85.513
SRR9715742Root133.329
SRR9715743Root123.383

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.202
SRR8749028MeJA induced 9h252.544
SRR8749029MeJA induced 9h46.161
SRR8749030Uninduced169.983
SRR8749031Uninduced323.506
SRR8749032Uninduced127.345

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root140.618
SRR8400027Control-Root60.933

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved