Gene detail information of Glyur001059s00033844.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20050.1 | 3.00E-98 | Protein kinase superfamily protein |
| NR | KHN47926.1 | 0 | Putative receptor-like protein kinase [Glycine soja] |
| COG | YP_829095.1 | 4.00E-14 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| Swissprot | tr|Q94C25|Y5005_ARATH | 1.00E-129 | Probable receptor-like protein kinase At5g20050 (Precursor) |
| trEMBL | tr|I1JW79|I1JW79_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G20870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01059 | 40283 | 42096 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.9.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001059s00033844.1 | PF07714.12 | Pkinase_Tyr | 109 | 186 | 7.50E-11 |
| Glyur001059s00033844.1 | PF00069.20 | Pkinase | 187 | 346 | 1.30E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.029 |
| SRR1783600 | control | 0.029 |
| SRR1783602 | moderate drought stress | 0.043 |
| SRR1811619 | moderate drought stress | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.173 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.085 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.233 |
| SRR2868004 | Drought Stress(Tissue:root) | 28.102 |
| SRR2967015 | Control (Tissue:root) | 24.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.099 |
| SRR9715743 | Root | 0.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.389 |
| SRR8749028 | MeJA induced 9h | 14.393 |
| SRR8749029 | MeJA induced 9h | 6.933 |
| SRR8749030 | Uninduced | 20.726 |
| SRR8749031 | Uninduced | 17.760 |
| SRR8749032 | Uninduced | 4.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.659 |
| SRR8400027 | Control-Root | 8.151 |