Gene detail information of Glyur001060s00031989.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50240.20Protein kinase family protein with ARM repeat domain
NRXP_004513201.10PREDICTED: serine/threonine-protein kinase TIO-like [Cicer arietinum]
COGYP_003523895.12.00E-24serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1]
Swissprottr|Q2QAV0|TIO_ARATH0Serine/threonine-protein kinase TIO
trEMBLtr|A0A072VHQ1|A0A072VHQ1_MEDTR0Serine/Threonine kinase domain protein {ECO:0000313|EMBL:KEH41322.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010606156076223-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06228FU EC:2.7.11.1 Hedgehog signaling pathway - fly map04341
Pathways in cancermap05200
Basal cell carcinomamap05217


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005488  binding

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001060s00031989.1PF00069.20Pkinase7551.60E-06
Glyur001060s00031989.1PF00069.20Pkinase571894.70E-44
Glyur001060s00031989.1PF13646.1HEAT_2108211861.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.370
SRR1783600control6.292
SRR1783602moderate drought stress6.591
SRR1811619moderate drought stress6.674

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.255
DRR006520Root Summer glycyrrhizin high producing strain9.078
DRR006521Root Winter glycyrrhizin high producing strain2.000
DRR006522Root Winter glycyrrhizin high producing strain1.923
DRR006523Root Summer glycyrrhizin low producing strain4.685
DRR006524Root Summer glycyrrhizin low producing strain4.736
DRR006525Leaf Summer glycyrrhizin high producing strain1.005
DRR006526Leaf Summer glycyrrhizin high producing strain0.998

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.510
SRR2868004Drought Stress(Tissue:root)5.601
SRR2967015Control (Tissue:root)6.534

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.169
SRR9715740Leave1.143
SRR9715741Leave3.015
SRR9715739Root0.687
SRR9715742Root5.739
SRR9715743Root5.720

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.361
SRR8749028MeJA induced 9h7.273
SRR8749029MeJA induced 9h5.011
SRR8749030Uninduced2.052
SRR8749031Uninduced1.173
SRR8749032Uninduced1.660

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.857
SRR8400027Control-Root11.507

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved