Gene detail information of Glyur001067s00029144.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G46590.1 | 9.00E-27 | NAC domain containing protein 96 |
| NR | XP_003549977.1 | 3.59E-41 | PREDICTED: NAC domain-containing protein 78-like [Glycine max] |
| Swissprot | tr|A4VCM0|NAC45_ARATH | 1.00E-20 | NAC domain-containing protein 45 {ECO:0000312|EMBL:AEE73912.1} |
| trEMBL | tr|K7MLU0|K7MLU0_SOYBN | 1.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G16500.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01067 | 35030 | 37204 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001067s00029144.1 | PF02365.10 | NAM | 6 | 117 | 6.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.912 |
| SRR1783600 | control | 13.073 |
| SRR1783602 | moderate drought stress | 5.615 |
| SRR1811619 | moderate drought stress | 5.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.422 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.020 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.453 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.060 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.436 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.678 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.387 |
| SRR2967015 | Control (Tissue:root) | 6.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.962 |
| SRR9715740 | Leave | 4.122 |
| SRR9715741 | Leave | 6.655 |
| SRR9715739 | Root | 1.388 |
| SRR9715742 | Root | 4.825 |
| SRR9715743 | Root | 3.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.128 |
| SRR8749028 | MeJA induced 9h | 0.454 |
| SRR8749029 | MeJA induced 9h | 0.522 |
| SRR8749030 | Uninduced | 0.673 |
| SRR8749031 | Uninduced | 0.594 |
| SRR8749032 | Uninduced | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.303 |
| SRR8400027 | Control-Root | 8.443 |