Gene detail information of Glyur001068s00035969.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11470.16.00E-774'-phosphopantetheinyl transferase superfamily
NRKEH42009.15.36E-1724'-phosphopantetheinyl transferase family protein [Medicago truncatula]
COGYP_008152537.11.00E-384-phosphopantetheinyl transferase [Sorangium cellulosum So0157-2]
trEMBLtr|A0A072VJ05|A0A072VJ05_MEDTR2.00E-1724'-phosphopantetheinyl transferase family protein {ECO:0000313|EMBL:KEH42009.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010686724772556+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06133LYS5, acpT EC:2.7.8.- Pantothenate and CoA biosynthesis map00770


Gene Ontology

molecular_function

GO:0000287  magnesium ion binding

GO:0008897  holo-[acyl-carrier-protein] synthase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001068s00035969.1PF01648.15ACPS2443572.10E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.932
SRR1783600control7.367
SRR1783602moderate drought stress6.861
SRR1811619moderate drought stress6.873

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.246
DRR006520Root Summer glycyrrhizin high producing strain12.408
DRR006521Root Winter glycyrrhizin high producing strain13.331
DRR006522Root Winter glycyrrhizin high producing strain13.011
DRR006523Root Summer glycyrrhizin low producing strain9.047
DRR006524Root Summer glycyrrhizin low producing strain9.613
DRR006525Leaf Summer glycyrrhizin high producing strain19.491
DRR006526Leaf Summer glycyrrhizin high producing strain19.340

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.200
SRR2868004Drought Stress(Tissue:root)14.249
SRR2967015Control (Tissue:root)14.222

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.294
SRR9715740Leave23.134
SRR9715741Leave15.812
SRR9715739Root2.096
SRR9715742Root5.740
SRR9715743Root3.454

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.758
SRR8749028MeJA induced 9h12.752
SRR8749029MeJA induced 9h7.782
SRR8749030Uninduced10.517
SRR8749031Uninduced6.586
SRR8749032Uninduced5.772

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.179
SRR8400027Control-Root12.738

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved