Gene detail information of Glyur001069s00022460.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G34500.13.00E-110Protein kinase superfamily protein
NRXP_003606898.10Protein kinase family protein [Medicago truncatula]
COGNP_811683.11.00E-08serine/threonine-protein kinase pknB [Bacteroides thetaiotaomicron VPI-5482]
Swissprottr|Q6NKZ9|Y4345_ARATH1.00E-127Probable receptor-like serine/threonine-protein kinase At4g34500
trEMBLtr|G7JG55|G7JG55_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES89095.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0106923255961-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001069s00022460.1PF07714.12Pkinase_Tyr1582652.60E-16
Glyur001069s00022460.1PF07714.12Pkinase_Tyr2663694.00E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.112
SRR1783600control32.078
SRR1783602moderate drought stress38.397
SRR1811619moderate drought stress39.344

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.170
DRR006520Root Summer glycyrrhizin high producing strain35.899
DRR006521Root Winter glycyrrhizin high producing strain8.610
DRR006522Root Winter glycyrrhizin high producing strain8.321
DRR006523Root Summer glycyrrhizin low producing strain35.631
DRR006524Root Summer glycyrrhizin low producing strain34.928
DRR006525Leaf Summer glycyrrhizin high producing strain11.000
DRR006526Leaf Summer glycyrrhizin high producing strain10.980

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.783
SRR2868004Drought Stress(Tissue:root)37.332
SRR2967015Control (Tissue:root)65.626

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.659
SRR9715740Leave5.810
SRR9715741Leave7.628
SRR9715739Root15.617
SRR9715742Root23.950
SRR9715743Root20.228

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.537
SRR8749028MeJA induced 9h9.193
SRR8749029MeJA induced 9h12.346
SRR8749030Uninduced0.953
SRR8749031Uninduced0.361
SRR8749032Uninduced1.626

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.526
SRR8400027Control-Root33.052

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved