Gene detail information of Glyur001069s00022469.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21710.1 | 3.00E-158 | Mitochondrial transcription termination factor family protein |
| NR | XP_004507447.1 | 0 | PREDICTED: uncharacterized protein LOC101506030 isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7JG65|G7JG65_MEDTR | 0 | Transcription termination factor family protein {ECO:0000313|EMBL:AES89105.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01069 | 38675 | 42132 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001069s00022469.1 | PF02536.9 | mTERF | 40 | 357 | 4.40E-54 |
| Glyur001069s00022469.1 | PF02536.9 | mTERF | 43 | 110 | 1.90E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.781 |
| SRR1783600 | control | 1.763 |
| SRR1783602 | moderate drought stress | 2.608 |
| SRR1811619 | moderate drought stress | 3.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.943 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.561 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.012 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.724 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.602 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.144 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.824 |
| SRR2967015 | Control (Tissue:root) | 3.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.519 |
| SRR9715740 | Leave | 7.747 |
| SRR9715741 | Leave | 3.336 |
| SRR9715739 | Root | 0.080 |
| SRR9715742 | Root | 0.798 |
| SRR9715743 | Root | 1.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.889 |
| SRR8749028 | MeJA induced 9h | 2.523 |
| SRR8749029 | MeJA induced 9h | 1.726 |
| SRR8749030 | Uninduced | 0.741 |
| SRR8749031 | Uninduced | 1.174 |
| SRR8749032 | Uninduced | 0.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.571 |
| SRR8400027 | Control-Root | 1.432 |