Gene detail information of Glyur001069s00022471.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G21710.10Mitochondrial transcription termination factor family protein
NRXP_004507447.10PREDICTED: uncharacterized protein LOC101506030 isoform X2 [Cicer arietinum]
trEMBLtr|G7JG65|G7JG65_MEDTR0Transcription termination factor family protein {ECO:0000313|EMBL:AES89105.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010695002456338+


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001069s00022471.1PF02536.9mTERF2735874.80E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.863
SRR1783600control0.858
SRR1783602moderate drought stress1.837
SRR1811619moderate drought stress1.963

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.539
DRR006520Root Summer glycyrrhizin high producing strain2.692
DRR006521Root Winter glycyrrhizin high producing strain1.998
DRR006522Root Winter glycyrrhizin high producing strain2.159
DRR006523Root Summer glycyrrhizin low producing strain2.737
DRR006524Root Summer glycyrrhizin low producing strain2.837
DRR006525Leaf Summer glycyrrhizin high producing strain6.686
DRR006526Leaf Summer glycyrrhizin high producing strain6.895

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.858
SRR2868004Drought Stress(Tissue:root)0.593
SRR2967015Control (Tissue:root)1.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.249
SRR9715740Leave5.275
SRR9715741Leave2.221
SRR9715739Root0.079
SRR9715742Root0.497
SRR9715743Root0.717

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.729
SRR8749028MeJA induced 9h1.685
SRR8749029MeJA induced 9h0.543
SRR8749030Uninduced0.245
SRR8749031Uninduced0.341
SRR8749032Uninduced0.177

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.238
SRR8400027Control-Root1.367

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved