Gene detail information of Glyur001070s00024970.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.12.00E-92alcohol dehydrogenase 1
NRKHN44002.11.98E-144Alcohol dehydrogenase 1 [Glycine soja]
COGYP_008046593.12.00E-78alcohol dehydrogenase GroES-like protein [Spiribacter salinus M19-40]
Swissprottr|P12886|ADH1_PEA5.00E-142Alcohol dehydrogenase 1
trEMBLtr|I1MA91|I1MA91_SOYBN6.00E-145Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0107011853798+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001070s00024970.1PF08240.7ADH_N17626.00E-08
Glyur001070s00024970.1PF00107.21ADH_zinc_N922213.00E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.948
SRR1783600control45.184
SRR1783602moderate drought stress169.328
SRR1811619moderate drought stress168.709

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain88.955
DRR006520Root Summer glycyrrhizin high producing strain90.300
DRR006521Root Winter glycyrrhizin high producing strain148.142
DRR006522Root Winter glycyrrhizin high producing strain138.204
DRR006523Root Summer glycyrrhizin low producing strain129.212
DRR006524Root Summer glycyrrhizin low producing strain129.576
DRR006525Leaf Summer glycyrrhizin high producing strain23.119
DRR006526Leaf Summer glycyrrhizin high producing strain23.922

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.875
SRR2868004Drought Stress(Tissue:root)1.685
SRR2967015Control (Tissue:root)12.033

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.354
SRR9715740Leave0.454
SRR9715741Leave1.167
SRR9715739Root20.106
SRR9715742Root16.544
SRR9715743Root15.863

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.535
SRR8749028MeJA induced 9h28.304
SRR8749029MeJA induced 9h8.809
SRR8749030Uninduced136.330
SRR8749031Uninduced74.971
SRR8749032Uninduced122.303

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.311
SRR8400027Control-Root23.796