Gene detail information of Glyur001070s00024970.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G77120.1 | 2.00E-92 | alcohol dehydrogenase 1 |
NR | KHN44002.1 | 1.98E-144 | Alcohol dehydrogenase 1 [Glycine soja] |
COG | YP_008046593.1 | 2.00E-78 | alcohol dehydrogenase GroES-like protein [Spiribacter salinus M19-40] |
Swissprot | tr|P12886|ADH1_PEA | 5.00E-142 | Alcohol dehydrogenase 1 |
trEMBL | tr|I1MA91|I1MA91_SOYBN | 6.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24860.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold01070 | 1185 | 3798 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K18857 | ADH1 | EC:1.1.1.1 | Glycolysis / Gluconeogenesis | map00010 |
Fatty acid degradation | map00071 | |||
alpha-Linolenic acid metabolism | map00592 | |||
Tyrosine metabolism | map00350 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur001070s00024970.1 | PF08240.7 | ADH_N | 17 | 62 | 6.00E-08 |
Glyur001070s00024970.1 | PF00107.21 | ADH_zinc_N | 92 | 221 | 3.00E-22 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 43.948 |
SRR1783600 | control | 45.184 |
SRR1783602 | moderate drought stress | 169.328 |
SRR1811619 | moderate drought stress | 168.709 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 88.955 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 90.300 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 148.142 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 138.204 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 129.212 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 129.576 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.119 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.922 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.875 |
SRR2868004 | Drought Stress(Tissue:root) | 1.685 |
SRR2967015 | Control (Tissue:root) | 12.033 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 5.354 |
SRR9715740 | Leave | 0.454 |
SRR9715741 | Leave | 1.167 |
SRR9715739 | Root | 20.106 |
SRR9715742 | Root | 16.544 |
SRR9715743 | Root | 15.863 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 6.535 |
SRR8749028 | MeJA induced 9h | 28.304 |
SRR8749029 | MeJA induced 9h | 8.809 |
SRR8749030 | Uninduced | 136.330 |
SRR8749031 | Uninduced | 74.971 |
SRR8749032 | Uninduced | 122.303 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 17.311 |
SRR8400027 | Control-Root | 23.796 |