Gene detail information of Glyur001082s00037374.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08750.33.00E-158Peptidase C13 family
NRKEH38031.10GPI-anchor transamidase-like protein [Medicago truncatula]
COGYP_501969.12.00E-28Legumain [Methanospirillum hungatei JF-1]
Swissprottr|P49047|VPEA_ARATH4.00E-24Vacuolar-processing enzyme alpha-isozyme (Precursor)
trEMBLtr|A0A072V8S6|A0A072V8S6_MEDTR0GPI-anchor transamidase-like protein {ECO:0000313|EMBL:KEH38031.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010826113669284+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05290PIGK EC:2.6.-.- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006508  proteolysis

GO:0016255  attachment of GPI anchor to protein


cellular_component

GO:0042765  GPI-anchor transamidase complex


molecular_function

GO:0003923  GPI-anchor transamidase activity

GO:0008233  peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001082s00037374.1PF01650.13Peptidase_C13462796.90E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.856
SRR1783600control9.854
SRR1783602moderate drought stress8.723
SRR1811619moderate drought stress8.377

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.391
DRR006520Root Summer glycyrrhizin high producing strain15.127
DRR006521Root Winter glycyrrhizin high producing strain11.240
DRR006522Root Winter glycyrrhizin high producing strain10.952
DRR006523Root Summer glycyrrhizin low producing strain13.896
DRR006524Root Summer glycyrrhizin low producing strain13.839
DRR006525Leaf Summer glycyrrhizin high producing strain5.430
DRR006526Leaf Summer glycyrrhizin high producing strain5.251

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.439
SRR2868004Drought Stress(Tissue:root)17.047
SRR2967015Control (Tissue:root)16.026

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.564
SRR9715740Leave8.711
SRR9715741Leave8.500
SRR9715739Root3.786
SRR9715742Root8.330
SRR9715743Root7.754

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.350
SRR8749028MeJA induced 9h22.037
SRR8749029MeJA induced 9h12.318
SRR8749030Uninduced9.039
SRR8749031Uninduced6.354
SRR8749032Uninduced4.631

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.452
SRR8400027Control-Root18.750

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved