Gene detail information of Glyur001088s00027873.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G53380.10Concanavalin A-like lectin protein kinase family protein
NRXP_003616189.10Lectin receptor kinase-like protein [Medicago truncatula]
COGYP_004571825.12.00E-23serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9LFH9|LRK81_ARATH0L-type lectin-domain containing receptor kinase VIII.1 (Precursor)
trEMBLtr|G7KFW0|G7KFW0_MEDTR0L-type lectin-domain receptor kinase {ECO:0000313|EMBL:AES99147.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010884366645780-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001088s00027873.1PF00139.14Lectin_legB242442.10E-58
Glyur001088s00027873.1PF00069.20Pkinase3755763.00E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.227
SRR1783600control3.879
SRR1783602moderate drought stress2.339
SRR1811619moderate drought stress2.296

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.943
DRR006520Root Summer glycyrrhizin high producing strain3.875
DRR006521Root Winter glycyrrhizin high producing strain0.243
DRR006522Root Winter glycyrrhizin high producing strain0.195
DRR006523Root Summer glycyrrhizin low producing strain1.741
DRR006524Root Summer glycyrrhizin low producing strain1.622
DRR006525Leaf Summer glycyrrhizin high producing strain3.333
DRR006526Leaf Summer glycyrrhizin high producing strain3.132

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.144
SRR2868004Drought Stress(Tissue:root)8.697
SRR2967015Control (Tissue:root)8.603

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.727
SRR9715740Leave0.772
SRR9715741Leave1.172
SRR9715739Root3.257
SRR9715742Root6.665
SRR9715743Root4.618

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.518
SRR8749028MeJA induced 9h7.180
SRR8749029MeJA induced 9h3.192
SRR8749030Uninduced0.817
SRR8749031Uninduced0.428
SRR8749032Uninduced0.444

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.521
SRR8400027Control-Root8.181

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved