Gene detail information of Glyur001089s00021499.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10940.12.00E-144Protein kinase superfamily protein
NRKEH35656.10sucrose non-fermenting-like kinase 2 family protein [Medicago truncatula]
COGNP_109936.12.00E-16Ser/Thr/Tyr protein kinase [Mycoplasma pneumoniae M129]
Swissprottr|Q7XQP4|SAPK7_ORYSJ0Serine/threonine-protein kinase SAPK7
trEMBLtr|A0A072V1U0|A0A072V1U0_MEDTR0Sucrose non-fermenting-like kinase 2 family protein {ECO:0000313|EMBL:KEH35656.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0108911955002+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001089s00021499.2PF00069.20Pkinase232544.00E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.133
SRR1783600control33.149
SRR1783602moderate drought stress31.463
SRR1811619moderate drought stress31.601

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain53.449
DRR006520Root Summer glycyrrhizin high producing strain53.773
DRR006521Root Winter glycyrrhizin high producing strain175.919
DRR006522Root Winter glycyrrhizin high producing strain172.068
DRR006523Root Summer glycyrrhizin low producing strain71.095
DRR006524Root Summer glycyrrhizin low producing strain71.340
DRR006525Leaf Summer glycyrrhizin high producing strain31.973
DRR006526Leaf Summer glycyrrhizin high producing strain32.086

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.664
SRR2868004Drought Stress(Tissue:root)66.878
SRR2967015Control (Tissue:root)68.878

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave76.177
SRR9715740Leave66.477
SRR9715741Leave88.668
SRR9715739Root9.190
SRR9715742Root41.116
SRR9715743Root35.683

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.146
SRR8749028MeJA induced 9h67.490
SRR8749029MeJA induced 9h61.183
SRR8749030Uninduced107.170
SRR8749031Uninduced109.645
SRR8749032Uninduced138.753

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root78.135
SRR8400027Control-Root88.219

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved