Gene detail information of Glyur001090s00029960.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44940.1 | 3.00E-31 | Integrase-type DNA-binding superfamily protein |
| NR | KHN43745.1 | 5.59E-76 | Ethylene-responsive transcription factor ERF034 [Glycine soja] |
| Swissprot | tr|Q8LBQ7|ERF34_ARATH | 5.00E-53 | Ethylene-responsive transcription factor ERF034 |
| trEMBL | tr|I1JMV1|I1JMV1_SOYBN | 6.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G27050.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01090 | 4109 | 4627 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001090s00029960.1 | PF00847.15 | AP2 | 2 | 45 | 9.80E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.445 |
| SRR1783600 | control | 2.227 |
| SRR1783602 | moderate drought stress | 2.853 |
| SRR1811619 | moderate drought stress | 2.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.514 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.086 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.213 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.420 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.690 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.412 |
| SRR2967015 | Control (Tissue:root) | 2.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.519 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.728 |
| SRR9715743 | Root | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.158 |
| SRR8749028 | MeJA induced 9h | 7.284 |
| SRR8749029 | MeJA induced 9h | 3.425 |
| SRR8749030 | Uninduced | 1.938 |
| SRR8749031 | Uninduced | 0.148 |
| SRR8749032 | Uninduced | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.651 |
| SRR8400027 | Control-Root | 2.564 |