Gene detail information of Glyur001092s00028393.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47850.10CRINKLY4 related 4
NRXP_004506371.10PREDICTED: serine/threonine-protein kinase-like protein CCR4-like [Cicer arietinum]
COGYP_001277089.16.00E-21protein kinase [Roseiflexus sp. RS-1]
Swissprottr|Q9FIJ6|ACCR4_ARATH0Serine/threonine-protein kinase-like protein CCR4 (Precursor)
trEMBLtr|C6ZRU3|C6ZRU3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010926032662728+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001092s00028393.1PF13540.1RCC1_22172382.10E-05
Glyur001092s00028393.1PF00069.20Pkinase4847735.30E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.789
SRR1783600control0.794
SRR1783602moderate drought stress0.344
SRR1811619moderate drought stress0.358

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.859
DRR006520Root Summer glycyrrhizin high producing strain45.901
DRR006521Root Winter glycyrrhizin high producing strain1.202
DRR006522Root Winter glycyrrhizin high producing strain1.171
DRR006523Root Summer glycyrrhizin low producing strain41.838
DRR006524Root Summer glycyrrhizin low producing strain41.688
DRR006525Leaf Summer glycyrrhizin high producing strain18.039
DRR006526Leaf Summer glycyrrhizin high producing strain17.912

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.053
SRR2868004Drought Stress(Tissue:root)5.157
SRR2967015Control (Tissue:root)13.467

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.936
SRR9715740Leave69.238
SRR9715741Leave63.241
SRR9715739Root47.807
SRR9715742Root73.552
SRR9715743Root66.001

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.338
SRR8749028MeJA induced 9h41.199
SRR8749029MeJA induced 9h22.840
SRR8749030Uninduced73.129
SRR8749031Uninduced27.560
SRR8749032Uninduced25.655

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.102
SRR8400027Control-Root7.694

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved