Gene detail information of Glyur001092s00028394.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72180.10Leucine-rich receptor-like protein kinase family protein
NRNP_001241340.10receptor-like protein kinase HSL1-like [Glycine max]
COGYP_004775215.13.00E-48RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH1.00E-152Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|C6ZRU4|C6ZRU4_SOYBN0Leucine-rich repeat transmembrane protein kinase {ECO:0000313|EMBL:ACM89538.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010926670470545-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001092s00028394.1PF08263.7LRRNT_26421.40E-13
Glyur001092s00028394.1PF00560.28LRR_1961150.097
Glyur001092s00028394.1PF00560.28LRR_11191410.93
Glyur001092s00028394.1PF13855.1LRR_81672272.30E-07
Glyur001092s00028394.1PF13516.1LRR_63133331
Glyur001092s00028394.1PF12799.2LRR_44324682.00E-06
Glyur001092s00028394.1PF00560.28LRR_15045240.2
Glyur001092s00028394.1PF00069.20Pkinase6567451.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.659
SRR1783600control21.703
SRR1783602moderate drought stress16.218
SRR1811619moderate drought stress16.355

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.602
DRR006520Root Summer glycyrrhizin high producing strain25.155
DRR006521Root Winter glycyrrhizin high producing strain4.260
DRR006522Root Winter glycyrrhizin high producing strain4.111
DRR006523Root Summer glycyrrhizin low producing strain19.957
DRR006524Root Summer glycyrrhizin low producing strain20.309
DRR006525Leaf Summer glycyrrhizin high producing strain12.628
DRR006526Leaf Summer glycyrrhizin high producing strain12.637

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.418
SRR2868004Drought Stress(Tissue:root)20.670
SRR2967015Control (Tissue:root)23.324

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.199
SRR9715740Leave26.574
SRR9715741Leave23.607
SRR9715739Root15.803
SRR9715742Root33.971
SRR9715743Root30.634

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.466
SRR8749028MeJA induced 9h0.740
SRR8749029MeJA induced 9h0.392
SRR8749030Uninduced0.725
SRR8749031Uninduced0.035
SRR8749032Uninduced0.019

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.816
SRR8400027Control-Root40.362

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved