Gene detail information of Glyur001092s00028396.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006591947.1 | 0 | PREDICTED: protein prune homolog isoform X1 [Glycine max] |
| trEMBL | tr|K7LS81|K7LS81_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00481.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01092 | 76528 | 84441 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01514 | PRUNE, PPX1 | EC:3.6.1.11 | Purine metabolism | map00230 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.139 |
| SRR1783600 | control | 0.125 |
| SRR1783602 | moderate drought stress | 0.409 |
| SRR1811619 | moderate drought stress | 0.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.130 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.068 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.056 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.415 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.474 |
| SRR2967015 | Control (Tissue:root) | 0.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.073 |
| SRR9715739 | Root | 0.044 |
| SRR9715742 | Root | 0.415 |
| SRR9715743 | Root | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.127 |
| SRR8749029 | MeJA induced 9h | 0.006 |
| SRR8749030 | Uninduced | 0.139 |
| SRR8749031 | Uninduced | 0.092 |
| SRR8749032 | Uninduced | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.927 |
| SRR8400027 | Control-Root | 1.127 |