Gene detail information of Glyur001094s00031546.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G03390.11.00E-35STRUBBELIG-receptor family 3
NRXP_006582789.15.51E-46PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Glycine max]
COGYP_004099201.12.00E-06serine/threonine protein kinase with PASTA sensor(s) [Intrasporangium calvum DSM 43043]
Swissprottr|Q6R2K3|SRF3_ARATH7.00E-41Protein STRUBBELIG-RECEPTOR FAMILY 3 (Precursor)
trEMBLtr|K7LU51|K7LU51_SOYBN6.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G11835.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0109468667569-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001094s00031546.1PF07714.12Pkinase_Tyr9742.90E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.508
SRR1783600control1.984
SRR1783602moderate drought stress2.515
SRR1811619moderate drought stress2.861

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.138
DRR006520Root Summer glycyrrhizin high producing strain1.394
DRR006521Root Winter glycyrrhizin high producing strain1.850
DRR006522Root Winter glycyrrhizin high producing strain1.859
DRR006523Root Summer glycyrrhizin low producing strain0.529
DRR006524Root Summer glycyrrhizin low producing strain0.621
DRR006525Leaf Summer glycyrrhizin high producing strain0.944
DRR006526Leaf Summer glycyrrhizin high producing strain0.564

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.825
SRR2868004Drought Stress(Tissue:root)5.561
SRR2967015Control (Tissue:root)3.096

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.500
SRR9715740Leave1.517
SRR9715741Leave0.783
SRR9715739Root1.906
SRR9715742Root0.845
SRR9715743Root1.278

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.533
SRR8749028MeJA induced 9h5.586
SRR8749029MeJA induced 9h2.761
SRR8749030Uninduced0.279
SRR8749031Uninduced0.668
SRR8749032Uninduced0.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.555
SRR8400027Control-Root6.706

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved