Gene detail information of Glyur001095s00030005.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52600.2 | 2.00E-47 | cell wall invertase 2 |
| NR | KHN46025.1 | 3.16E-93 | Beta-fructofuranosidase, insoluble isoenzyme 1 [Glycine soja] |
| Swissprot | tr|P26792|INV1_DAUCA | 7.00E-74 | Beta-fructofuranosidase, insoluble isoenzyme 1 (Precursor) |
| trEMBL | tr|A0A072VKQ2|A0A072VKQ2_MEDTR | 7.00E-93 | Beta-fructofuranosidase {ECO:0000313|EMBL:KEH42003.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01095 | 218 | 1168 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH32 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01193 | INV, sacA | EC:3.2.1.26 | Galactose metabolism | map00052 |
| Starch and sucrose metabolism | map00500 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001095s00030005.1 | PF08244.7 | Glyco_hydro_32C | 40 | 120 | 1.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.175 |
| SRR1783600 | control | 1.195 |
| SRR1783602 | moderate drought stress | 1.691 |
| SRR1811619 | moderate drought stress | 1.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.625 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.653 |
| SRR2967015 | Control (Tissue:root) | 2.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.233 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.811 |
| SRR9715743 | Root | 1.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.051 |
| SRR8400027 | Control-Root | 6.594 |