Gene detail information of Glyur001099s00027724.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G19360.11.00E-176Nucleotide-diphospho-sugar transferase family protein
NRKEH40105.10nucleotide-diphospho-sugar transferase family protein [Medicago truncatula]
Swissprottr|Q9ZSJ0|RGXT2_ARATH1.00E-07UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2
trEMBLtr|A0A072VPP4|A0A072VPP4_MEDTR0Nucleotide-diphospho-sugar transferase family protein {ECO:0000313|EMBL:KEH40105.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010994130444073-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT77


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20783RRA EC:2.4.2.- Other types of O-glycan biosynthesis map00514


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001099s00027724.1PF03407.11Nucleotid_trans1874092.90E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.157
SRR1783600control17.356
SRR1783602moderate drought stress18.179
SRR1811619moderate drought stress18.130

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.290
DRR006520Root Summer glycyrrhizin high producing strain26.360
DRR006521Root Winter glycyrrhizin high producing strain18.049
DRR006522Root Winter glycyrrhizin high producing strain17.675
DRR006523Root Summer glycyrrhizin low producing strain37.704
DRR006524Root Summer glycyrrhizin low producing strain37.823
DRR006525Leaf Summer glycyrrhizin high producing strain20.417
DRR006526Leaf Summer glycyrrhizin high producing strain20.130

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)97.762
SRR2868004Drought Stress(Tissue:root)96.435
SRR2967015Control (Tissue:root)88.257

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.011
SRR9715740Leave24.003
SRR9715741Leave29.913
SRR9715739Root54.466
SRR9715742Root47.550
SRR9715743Root46.882

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.514
SRR8749028MeJA induced 9h16.726
SRR8749029MeJA induced 9h10.963
SRR8749030Uninduced9.181
SRR8749031Uninduced4.594
SRR8749032Uninduced4.577

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.402
SRR8400027Control-Root52.316

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved