Gene detail information of Glyur001100s00028602.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47000.10Glycosyl hydrolase family protein
NRKHN40052.10Lysosomal beta glucosidase [Glycine soja]
COGYP_002508171.16.00E-143beta-N-acetylhexosaminidase [Halothermothrix orenii H 168]
Swissprottr|Q94KD8|BXL2_ARATH4.00E-21Probable beta-D-xylosidase 2 (Precursor)
trEMBLtr|I1MB94|I1MB94_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37070.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011003598641454-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05349bglX EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001100s00028602.1PF00933.16Glyco_hydro_3271886.00E-35
Glyur001100s00028602.1PF00933.16Glyco_hydro_32033001.60E-24
Glyur001100s00028602.1PF01915.17Glyco_hydro_3_C3375383.90E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.203
SRR1783600control0.110
SRR1783602moderate drought stress0.244
SRR1811619moderate drought stress0.274

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.256
DRR006520Root Summer glycyrrhizin high producing strain0.263
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.323
DRR006524Root Summer glycyrrhizin low producing strain0.176
DRR006525Leaf Summer glycyrrhizin high producing strain0.192
DRR006526Leaf Summer glycyrrhizin high producing strain0.204

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.890
SRR2868004Drought Stress(Tissue:root)6.709
SRR2967015Control (Tissue:root)6.305

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.187
SRR9715740Leave0.254
SRR9715741Leave0.080
SRR9715739Root0.433
SRR9715742Root0.466
SRR9715743Root0.688

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.223
SRR8749028MeJA induced 9h0.040
SRR8749029MeJA induced 9h0.074
SRR8749030Uninduced0.201
SRR8749031Uninduced0.000
SRR8749032Uninduced0.025

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.261
SRR8400027Control-Root3.055

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved