Gene detail information of Glyur001100s00028605.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G52020.11.00E-21Integrase-type DNA-binding superfamily protein
NRXP_004490579.10PREDICTED: uro-adherence factor A-like isoform X1 [Cicer arietinum]
Swissprottr|Q9LYD3|DREB3_ARATH5.00E-28Dehydration-responsive element-binding protein 3
trEMBLtr|G7K6A1|G7K6A1_MEDTR0Transmembrane protein, putative {ECO:0000313|EMBL:AES98539.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011004625649490-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001100s00028605.1PF00847.15AP27057535.30E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.772
SRR1783600control2.855
SRR1783602moderate drought stress1.611
SRR1811619moderate drought stress1.612

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.400
DRR006520Root Summer glycyrrhizin high producing strain1.308
DRR006521Root Winter glycyrrhizin high producing strain1.100
DRR006522Root Winter glycyrrhizin high producing strain1.006
DRR006523Root Summer glycyrrhizin low producing strain0.399
DRR006524Root Summer glycyrrhizin low producing strain0.317
DRR006525Leaf Summer glycyrrhizin high producing strain1.680
DRR006526Leaf Summer glycyrrhizin high producing strain1.783

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.349
SRR2868004Drought Stress(Tissue:root)1.180
SRR2967015Control (Tissue:root)0.758

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.204
SRR9715740Leave0.952
SRR9715741Leave0.665
SRR9715739Root1.420
SRR9715742Root1.028
SRR9715743Root1.023

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.892
SRR8749028MeJA induced 9h0.792
SRR8749029MeJA induced 9h1.209
SRR8749030Uninduced0.436
SRR8749031Uninduced0.387
SRR8749032Uninduced0.455

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.038
SRR8400027Control-Root1.888

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved