Gene detail information of Glyur001102s00033856.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24010.10Protein kinase superfamily protein
NRKHN03673.10Putative receptor-like protein kinase [Glycine soja]
COGYP_001958461.13.00E-21hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FLW0|Y5241_ARATH0Probable receptor-like protein kinase At5g24010 (Precursor)
trEMBLtr|V7C243|V7C243_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW24189.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011025525957799+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001102s00033856.1PF12819.2Malectin_like334021.80E-50
Glyur001102s00033856.1PF07714.12Pkinase_Tyr5097711.40E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.911
SRR1783600control0.917
SRR1783602moderate drought stress0.958
SRR1811619moderate drought stress1.001

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.535
DRR006520Root Summer glycyrrhizin high producing strain4.649
DRR006521Root Winter glycyrrhizin high producing strain7.229
DRR006522Root Winter glycyrrhizin high producing strain6.940
DRR006523Root Summer glycyrrhizin low producing strain14.015
DRR006524Root Summer glycyrrhizin low producing strain13.945
DRR006525Leaf Summer glycyrrhizin high producing strain1.695
DRR006526Leaf Summer glycyrrhizin high producing strain1.632

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.415
SRR2868004Drought Stress(Tissue:root)1.496
SRR2967015Control (Tissue:root)1.031

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.612
SRR9715740Leave1.824
SRR9715741Leave1.730
SRR9715739Root0.682
SRR9715742Root8.035
SRR9715743Root6.670

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.003
SRR8749028MeJA induced 9h0.642
SRR8749029MeJA induced 9h0.325
SRR8749030Uninduced0.643
SRR8749031Uninduced0.060
SRR8749032Uninduced0.076

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.588
SRR8400027Control-Root1.578

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved