Gene detail information of Glyur001104s00026658.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16110.1 | 3.00E-32 | response regulator 2 |
| NR | XP_004510876.1 | 7.91E-156 | PREDICTED: two-component response regulator ARR12-like isoform X6 [Cicer arietinum] |
| COG | YP_002775356.1 | 3.00E-08 | two-component hybrid sensor and regulator [Brevibacillus brevis NBRC 100599] |
| Swissprot | tr|Q9ZWJ9|ARR2_ARATH | 4.00E-34 | Two-component response regulator ARR2 |
| trEMBL | tr|A0A072TZK7|A0A072TZK7_MEDTR | 4.00E-147 | Response regulator receiver domain protein {ECO:0000313|EMBL:KEH18975.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01104 | 24356 | 28882 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001104s00026658.1 | PF00072.19 | Response_reg | 68 | 175 | 6.70E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.333 |
| SRR1783600 | control | 5.224 |
| SRR1783602 | moderate drought stress | 13.289 |
| SRR1811619 | moderate drought stress | 13.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.685 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.481 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.345 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.190 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.326 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.071 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.290 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.644 |
| SRR2967015 | Control (Tissue:root) | 5.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.801 |
| SRR9715740 | Leave | 3.660 |
| SRR9715741 | Leave | 6.096 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 2.635 |
| SRR9715743 | Root | 1.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.307 |
| SRR8749028 | MeJA induced 9h | 5.915 |
| SRR8749029 | MeJA induced 9h | 2.888 |
| SRR8749030 | Uninduced | 8.764 |
| SRR8749031 | Uninduced | 5.471 |
| SRR8749032 | Uninduced | 6.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.326 |
| SRR8400027 | Control-Root | 7.661 |