Gene detail information of Glyur001105s00029444.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02990.17.00E-174Mitochondrial transcription termination factor family protein
NRXP_004516636.10PREDICTED: uncharacterized protein LOC101489618 isoform X1 [Cicer arietinum]
trEMBLtr|V7B917|V7B917_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW13353.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011058651788157-


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001105s00029444.1PF02536.9mTERF1575035.50E-107


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.848
SRR1783600control6.810
SRR1783602moderate drought stress9.016
SRR1811619moderate drought stress8.857

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.222
DRR006520Root Summer glycyrrhizin high producing strain9.231
DRR006521Root Winter glycyrrhizin high producing strain7.917
DRR006522Root Winter glycyrrhizin high producing strain7.466
DRR006523Root Summer glycyrrhizin low producing strain13.943
DRR006524Root Summer glycyrrhizin low producing strain14.125
DRR006525Leaf Summer glycyrrhizin high producing strain14.156
DRR006526Leaf Summer glycyrrhizin high producing strain14.163

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.448
SRR2868004Drought Stress(Tissue:root)15.480
SRR2967015Control (Tissue:root)16.485

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.565
SRR9715740Leave29.498
SRR9715741Leave21.038
SRR9715739Root5.469
SRR9715742Root15.308
SRR9715743Root15.099

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.934
SRR8749028MeJA induced 9h6.495
SRR8749029MeJA induced 9h5.379
SRR8749030Uninduced2.298
SRR8749031Uninduced2.197
SRR8749032Uninduced1.546

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.033
SRR8400027Control-Root15.103

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved