Gene detail information of Glyur001110s00027594.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23620.1 | 6.00E-36 | methyl esterase 1 |
| NR | ACJ84705.1 | 2.78E-74 | unknown [Medicago truncatula] |
| Swissprot | tr|Q6RYA0|SABP2_TOBAC | 5.00E-49 | Salicylic acid-binding protein 2 |
| trEMBL | tr|B7FIX6|B7FIX6_MEDTR | 1.00E-74 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84705.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01110 | 4508 | 8714 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08233 | E3.1.1.78 | EC:3.1.1.78 | Indole alkaloid biosynthesis | map00901 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.064 |
| SRR1783600 | control | 1.361 |
| SRR1783602 | moderate drought stress | 4.764 |
| SRR1811619 | moderate drought stress | 3.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.712 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.581 |
| SRR2967015 | Control (Tissue:root) | 3.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.746 |
| SRR9715740 | Leave | 3.379 |
| SRR9715741 | Leave | 1.754 |
| SRR9715739 | Root | 0.402 |
| SRR9715742 | Root | 2.057 |
| SRR9715743 | Root | 1.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.032 |
| SRR8749030 | Uninduced | 0.828 |
| SRR8749031 | Uninduced | 1.410 |
| SRR8749032 | Uninduced | 1.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.438 |
| SRR8400027 | Control-Root | 2.202 |