Gene detail information of Glyur001112s00036227.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17040.14.00E-89NAC domain containing protein 36
NRXP_004505672.12.26E-173PREDICTED: protein FEZ-like [Cicer arietinum]
Swissprottr|Q9FIW5|NAC94_ARATH4.00E-53Putative NAC domain-containing protein 94
trEMBLtr|C7AFG3|C7AFG3_CICAR5.00E-173NAC family transcription factor 6 {ECO:0000313|EMBL:ACS94039.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011124359245923+


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001112s00036227.1PF02365.10NAM131404.60E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control86.287
SRR1783600control87.460
SRR1783602moderate drought stress23.170
SRR1811619moderate drought stress22.745

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain134.563
DRR006520Root Summer glycyrrhizin high producing strain134.036
DRR006521Root Winter glycyrrhizin high producing strain0.168
DRR006522Root Winter glycyrrhizin high producing strain0.164
DRR006523Root Summer glycyrrhizin low producing strain251.214
DRR006524Root Summer glycyrrhizin low producing strain253.330
DRR006525Leaf Summer glycyrrhizin high producing strain159.555
DRR006526Leaf Summer glycyrrhizin high producing strain159.334

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.834
SRR2868004Drought Stress(Tissue:root)10.578
SRR2967015Control (Tissue:root)16.218

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave453.728
SRR9715740Leave545.407
SRR9715741Leave419.403
SRR9715739Root123.271
SRR9715742Root195.444
SRR9715743Root173.500

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.616
SRR8749028MeJA induced 9h25.522
SRR8749029MeJA induced 9h40.108
SRR8749030Uninduced36.717
SRR8749031Uninduced6.450
SRR8749032Uninduced2.921

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.641
SRR8400027Control-Root35.905

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved