Gene detail information of Glyur001113s00028461.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63770.12.00E-27Peptidase M1 family protein
NRCAO02841.16.50E-29membrane alanylamino-peptidase [Medicago truncatula var. truncatula]
COGYP_001526036.12.00E-21aminopeptidase N [Azorhizobium caulinodans ORS 571]
Swissprottr|Q8H0S9|PSA_ARATH8.00E-30Puromycin-sensitive aminopeptidase
trEMBLtr|A9DJY0|A9DJY0_MEDTR2.00E-29Membrane alanylamino-peptidase {ECO:0000313|EMBL:CAO02855.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011137075673503-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01256pepN EC:3.4.11.2 Glutathione metabolism map00480


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0008237  metallopeptidase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001113s00028461.1PF01433.15Peptidase_M1971561.70E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.982
SRR1783600control1.719
SRR1783602moderate drought stress2.230
SRR1811619moderate drought stress1.844

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.625
DRR006520Root Summer glycyrrhizin high producing strain1.333
DRR006521Root Winter glycyrrhizin high producing strain2.735
DRR006522Root Winter glycyrrhizin high producing strain2.315
DRR006523Root Summer glycyrrhizin low producing strain2.711
DRR006524Root Summer glycyrrhizin low producing strain2.127
DRR006525Leaf Summer glycyrrhizin high producing strain1.369
DRR006526Leaf Summer glycyrrhizin high producing strain1.191

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.462
SRR2868004Drought Stress(Tissue:root)4.908
SRR2967015Control (Tissue:root)5.496

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.291
SRR9715740Leave2.416
SRR9715741Leave3.630
SRR9715739Root0.359
SRR9715742Root1.247
SRR9715743Root2.204

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.390
SRR8749028MeJA induced 9h0.144
SRR8749029MeJA induced 9h0.415
SRR8749030Uninduced0.147
SRR8749031Uninduced0.129
SRR8749032Uninduced0.080

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.902
SRR8400027Control-Root5.526