Gene detail information of Glyur001113s00028461.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G63770.1 | 2.00E-27 | Peptidase M1 family protein |
NR | CAO02841.1 | 6.50E-29 | membrane alanylamino-peptidase [Medicago truncatula var. truncatula] |
COG | YP_001526036.1 | 2.00E-21 | aminopeptidase N [Azorhizobium caulinodans ORS 571] |
Swissprot | tr|Q8H0S9|PSA_ARATH | 8.00E-30 | Puromycin-sensitive aminopeptidase |
trEMBL | tr|A9DJY0|A9DJY0_MEDTR | 2.00E-29 | Membrane alanylamino-peptidase {ECO:0000313|EMBL:CAO02855.1} (Fragment) |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold01113 | 70756 | 73503 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K01256 | pepN | EC:3.4.11.2 | Glutathione metabolism | map00480 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur001113s00028461.1 | PF01433.15 | Peptidase_M1 | 97 | 156 | 1.70E-12 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 1.982 |
SRR1783600 | control | 1.719 |
SRR1783602 | moderate drought stress | 2.230 |
SRR1811619 | moderate drought stress | 1.844 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 2.625 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 1.333 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 2.735 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 2.315 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 2.711 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 2.127 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.369 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.191 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 2.462 |
SRR2868004 | Drought Stress(Tissue:root) | 4.908 |
SRR2967015 | Control (Tissue:root) | 5.496 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 2.291 |
SRR9715740 | Leave | 2.416 |
SRR9715741 | Leave | 3.630 |
SRR9715739 | Root | 0.359 |
SRR9715742 | Root | 1.247 |
SRR9715743 | Root | 2.204 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 0.390 |
SRR8749028 | MeJA induced 9h | 0.144 |
SRR8749029 | MeJA induced 9h | 0.415 |
SRR8749030 | Uninduced | 0.147 |
SRR8749031 | Uninduced | 0.129 |
SRR8749032 | Uninduced | 0.080 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 5.902 |
SRR8400027 | Control-Root | 5.526 |