Gene detail information of Glyur001120s00031689.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G32780.13.00E-105GroES-like zinc-binding dehydrogenase family protein
NRXP_004492437.10PREDICTED: alcohol dehydrogenase-like 3-like isoform X1 [Cicer arietinum]
COGYP_001143866.12.00E-100Zn-dependent alcohol dehydrogenase class III [Aeromonas salmonicida subsp. salmonicida A449]
Swissprottr|A1L4Y2|ADHL3_ARATH4.00E-166Alcohol dehydrogenase-like 3
trEMBLtr|I1J7B3|I1J7B3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G28850.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01120284710097+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00001E1.1.1.1, adh EC:1.1.1.1 Degradation of aromatic compounds map01220
Glycolysis / Gluconeogenesismap00010
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001120s00031689.1PF08240.7ADH_N571861.20E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.011
SRR1783600control2.973
SRR1783602moderate drought stress7.818
SRR1811619moderate drought stress7.315

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.347
DRR006522Root Winter glycyrrhizin high producing strain0.272
DRR006523Root Summer glycyrrhizin low producing strain0.099
DRR006524Root Summer glycyrrhizin low producing strain0.098
DRR006525Leaf Summer glycyrrhizin high producing strain3.127
DRR006526Leaf Summer glycyrrhizin high producing strain2.963

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)118.114
SRR2868004Drought Stress(Tissue:root)292.724
SRR2967015Control (Tissue:root)216.335

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.160
SRR9715740Leave1.396
SRR9715741Leave6.576
SRR9715739Root5.950
SRR9715742Root10.160
SRR9715743Root9.005

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.322
SRR8749028MeJA induced 9h40.992
SRR8749029MeJA induced 9h43.422
SRR8749030Uninduced52.070
SRR8749031Uninduced170.825
SRR8749032Uninduced69.353

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root69.125
SRR8400027Control-Root51.234

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved