Gene detail information of Glyur001126s00037741.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22170.15.00E-134Phosphoglycerate mutase family protein
NRXP_006578329.10PREDICTED: phosphoglycerate mutase-like isoform X2 [Glycine max]
COGYP_007160.12.00E-98phosphoglyceromutase [Candidatus Protochlamydia amoebophila UWE25]
Swissprottr|Q9FNJ9|CA1P_ARATH3.00E-06Probable 2-carboxy-D-arabinitol-1-phosphatase {ECO:0000305} (Precursor)
trEMBLtr|I1JVH1|I1JVH1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G11380.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011262252226614-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01834PGAM, gpmA EC:5.4.2.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004619  phosphoglycerate mutase activity

GO:0016868  intramolecular transferase activity, phosphotransferases


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001126s00037741.1PF00300.17His_Phos_11273127.20E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.699
SRR1783600control0.703
SRR1783602moderate drought stress1.531
SRR1811619moderate drought stress1.562

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.872
DRR006520Root Summer glycyrrhizin high producing strain1.780
DRR006521Root Winter glycyrrhizin high producing strain1.349
DRR006522Root Winter glycyrrhizin high producing strain0.967
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain1.480
DRR006526Leaf Summer glycyrrhizin high producing strain1.371

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.335
SRR2868004Drought Stress(Tissue:root)0.773
SRR2967015Control (Tissue:root)0.922

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.245
SRR9715740Leave0.743
SRR9715741Leave0.430
SRR9715739Root0.554
SRR9715742Root0.477
SRR9715743Root0.565

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.526
SRR8749028MeJA induced 9h0.171
SRR8749029MeJA induced 9h0.425
SRR8749030Uninduced0.203
SRR8749031Uninduced0.591
SRR8749032Uninduced0.202

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.475
SRR8400027Control-Root8.141

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved