Gene detail information of Glyur001128s00028309.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17220.11.00E-14Protein kinase superfamily protein
NRCBI37651.32.87E-18unnamed protein product [Vitis vinifera]
Swissprottr|O48814|BIK1_ARATH5.00E-17Serine/threonine-protein kinase BIK1
trEMBLtr|F6I0K2|F6I0K2_VITVI1.00E-18Putative uncharacterized protein {ECO:0000313|EMBL:CCB60468.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011287956980061-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001128s00028309.1PF07714.12Pkinase_Tyr42877.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.247
SRR1783600control0.218
SRR1783602moderate drought stress2.293
SRR1811619moderate drought stress1.813

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.678
DRR006520Root Summer glycyrrhizin high producing strain0.218
DRR006521Root Winter glycyrrhizin high producing strain0.582
DRR006522Root Winter glycyrrhizin high producing strain0.343
DRR006523Root Summer glycyrrhizin low producing strain1.065
DRR006524Root Summer glycyrrhizin low producing strain1.415
DRR006525Leaf Summer glycyrrhizin high producing strain1.444
DRR006526Leaf Summer glycyrrhizin high producing strain1.591

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.079
SRR2868004Drought Stress(Tissue:root)1.167
SRR2967015Control (Tissue:root)0.844

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.266
SRR9715740Leave0.758
SRR9715741Leave1.328
SRR9715739Root0.000
SRR9715742Root0.061
SRR9715743Root0.184

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.263
SRR8749028MeJA induced 9h0.086
SRR8749029MeJA induced 9h0.090
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.745
SRR8400027Control-Root0.983

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved