Gene detail information of Glyur001129s00037013.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17950.1 | 1.00E-50 | myb domain protein 52 |
| NR | XP_003527964.1 | 5.37E-103 | PREDICTED: transcription factor LAF1-like [Glycine max] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 4.00E-36 | Transcription factor MYB44 |
| trEMBL | tr|K7KUM6|K7KUM6_SOYBN | 2.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12691.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01129 | 4820 | 7417 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001129s00037013.1 | PF13921.1 | Myb_DNA-bind_6 | 56 | 116 | 2.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.268 |
| SRR1783600 | control | 4.024 |
| SRR1783602 | moderate drought stress | 3.381 |
| SRR1811619 | moderate drought stress | 3.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.406 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.403 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.104 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.207 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.428 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.246 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.778 |
| SRR2967015 | Control (Tissue:root) | 3.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.104 |
| SRR9715740 | Leave | 0.520 |
| SRR9715741 | Leave | 0.061 |
| SRR9715739 | Root | 1.389 |
| SRR9715742 | Root | 2.203 |
| SRR9715743 | Root | 3.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.062 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.236 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.016 |
| SRR8400027 | Control-Root | 9.455 |