Gene detail

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Gene detail information of Glyur001131s00029303.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G18830.1	2.00E-30	ovate family protein 5
NR	KHN48028.1	2.22E-128	hypothetical protein glysoja_015498 [Glycine soja]
Swissprot	tr\|Q8VZN1\|OFP5_ARATH	1.00E-38	Transcription repressor OFP5
trEMBL	tr\|K7L659\|K7L659_SOYBN	3.00E-127	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G12620.2}

Sequence

Transcript Sequence

>Glyur001131s00029303.1
ATGATGAAGTGGGGAGGAAGAAAACCTTCTTCATCCTATCCTTCTTCTTCTAGAACTTCCTTCATCACTCAAGTATCTCCTTTTTCATGGCTGTCAAAGTTCANACAGATGAGAAACAATTCAGAGGCAAGACCTGAAAAGGTGAAGAAGCAGAATGCAAAGCAGAATTCCCCACCTGATAGTACACCACAATTTGCTTGTGGGAATAGAGGAAGGTTCTATGGAGGGGGTGATGATGATGCTTTCTGGAGATTGTCATTTGGTGAAGAGGGTACTACTAATGGACATATGAAAAGTGAAGATCTTCTGAAACCAGAAGTGCACAATTTGGATGCTAGAAGACATGGAAGAAGAGAAGCCACCCTGAAGTTGAAGCAGAAGGATACTGAACTGAGAGAAGAAAGAAAGTTGCCGAATGAAGAAACAAAGGGTGGTGAAGAGGGACATGAATGCTTAAAGAGGAGACATGAGAGGAAAGCACAAAGAGTTTTACAAGAGCAACTCTTGCAATTGGAAATTGAGGCAGAGGAAGCTGAATTTGCAGCAAAGGATGGGCCTCAATTTGAATCACCAAGGATAATTTGTACACCAAGGACACGCTTGATTTCCTCTTATGCAGATGGAAAAAAGTATGGCCTTGGAAGTATTATTAGAGAAGCTGGTGTGCCCAGAAACCGGAACTCAGAGAAGTTGCAGAATTTGAAACAAGGTGAGGACTTGGACTTGAAATTGAAAGCAAAGGTACTTAACAAAAATAGGGAATCAGTTCATGTGAGCAGAGAAGTTCAGAGGAGGAAACCAAAGCATACAAGCTCAAAGTCCAAGGTAAGAGTGTATTCTCCAAGGATGGCTTCCAAGGTTGAGATATGCAAAATAAAGGCTATAGAAGACAAAAGGAAAGCAAAACNAAAGATGAAGAGAGAAAAGGAATTTGTGGAGGGGACAGTAGTTGGACTAGATAGCTTTGCNGTGGTGAAGTGTTCTTTGGATCCACAACAAGATTTCAGGGACTCAATGATTGAGATGATCACTGAGAAACATATCAGCCANCCAGAGGAAATGGAAGAGCTTTTGGCATGTTATTTGACTTTGAATTCCAATGAGTACCATGATCTCATTATCAAGGTATTCAGGCAGGTGTGGTTATGTATGGGACAAGCTAGTTTGGGTATCAAATCAGAAAAGCAATGTTGTTGTTGCCATGATTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01131	73139	74347	-

Gene family

Gene family	subfamily
Transcription Factors Family	OFP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001131s00029303.1	PF04844.8	Ovate	328	383	5.30E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.108
SRR1783600	control	0.152
SRR1783602	moderate drought stress	0.472
SRR1811619	moderate drought stress	0.451

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.656
DRR006520	Root Summer glycyrrhizin high producing strain	0.711
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	2.956
DRR006524	Root Summer glycyrrhizin low producing strain	2.561
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.254
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.304

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.759
SRR2868004	Drought Stress(Tissue:root)	1.137
SRR2967015	Control (Tissue:root)	2.259

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.063
SRR9715740	Leave	0.352
SRR9715741	Leave	0.224
SRR9715739	Root	0.000
SRR9715742	Root	0.092
SRR9715743	Root	0.152

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.102
SRR8749028	MeJA induced 9h	0.055
SRR8749029	MeJA induced 9h	0.050
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.002
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.940
SRR8400027	Control-Root	1.248