Gene detail information of Glyur001133s00027787.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39940.1 | 0 | RNI-like superfamily protein |
| NR | XP_004503230.1 | 0 | PREDICTED: coronatine-insensitive protein 1-like [Cicer arietinum] |
| Swissprot | tr|O04197|COI1_ARATH | 0 | Coronatine-insensitive protein 1 |
| trEMBL | tr|Q45FY8|Q45FY8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01133 | 77024 | 80808 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | F-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 62.495 |
| SRR1783600 | control | 62.641 |
| SRR1783602 | moderate drought stress | 87.208 |
| SRR1811619 | moderate drought stress | 88.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 67.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 90.739 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 87.447 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.069 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.976 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.452 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 58.965 |
| SRR2868004 | Drought Stress(Tissue:root) | 73.704 |
| SRR2967015 | Control (Tissue:root) | 93.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.040 |
| SRR9715740 | Leave | 46.029 |
| SRR9715741 | Leave | 37.421 |
| SRR9715739 | Root | 66.725 |
| SRR9715742 | Root | 64.995 |
| SRR9715743 | Root | 67.823 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.265 |
| SRR8749028 | MeJA induced 9h | 24.026 |
| SRR8749029 | MeJA induced 9h | 9.449 |
| SRR8749030 | Uninduced | 6.279 |
| SRR8749031 | Uninduced | 3.003 |
| SRR8749032 | Uninduced | 4.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 72.635 |
| SRR8400027 | Control-Root | 75.764 |