Gene detail information of Glyur001134s00038253.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G11530.1 | 2.00E-23 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34 |
| NR | XP_006577407.1 | 3.29E-163 | PREDICTED: cysteine-rich receptor-like protein kinase 24-like [Glycine max] |
| Swissprot | tr|O48814|BIK1_ARATH | 1.00E-25 | Serine/threonine-protein kinase BIK1 |
| trEMBL | tr|K7KCK3|K7KCK3_SOYBN | 1.00E-163 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G03815.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01134 | 38990 | 41015 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001134s00038253.1 | PF00069.20 | Pkinase | 46 | 270 | 1.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.085 |
| SRR1783600 | control | 0.123 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.891 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.019 |
| SRR2967015 | Control (Tissue:root) | 6.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.080 |
| SRR8749028 | MeJA induced 9h | 0.202 |
| SRR8749029 | MeJA induced 9h | 0.100 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.510 |
| SRR8749032 | Uninduced | 0.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.353 |
| SRR8400027 | Control-Root | 0.327 |