Gene detail information of Glyur001135s00033673.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37790.1 | 9.00E-147 | Protein kinase superfamily protein |
| NR | XP_004517286.1 | 0 | PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Cicer arietinum] |
| COG | YP_007035844.1 | 4.00E-17 | putative serine/threonine protein kinase [Saccharothrix espanaensis DSM 44229] |
| Swissprot | tr|Q9CAL8|PEK13_ARATH | 6.00E-52 | Proline-rich receptor-like protein kinase PERK13 |
| trEMBL | tr|V7CZ40|V7CZ40_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW35389.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01135 | 45747 | 48761 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001135s00033673.1 | PF00069.20 | Pkinase | 184 | 441 | 3.50E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.471 |
| SRR1783600 | control | 3.582 |
| SRR1783602 | moderate drought stress | 3.483 |
| SRR1811619 | moderate drought stress | 3.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.012 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.757 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.155 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.445 |
| SRR2967015 | Control (Tissue:root) | 20.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.977 |
| SRR9715740 | Leave | 2.400 |
| SRR9715741 | Leave | 1.376 |
| SRR9715739 | Root | 5.313 |
| SRR9715742 | Root | 4.168 |
| SRR9715743 | Root | 4.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.443 |
| SRR8749028 | MeJA induced 9h | 2.465 |
| SRR8749029 | MeJA induced 9h | 1.469 |
| SRR8749030 | Uninduced | 0.426 |
| SRR8749031 | Uninduced | 0.092 |
| SRR8749032 | Uninduced | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.799 |
| SRR8400027 | Control-Root | 16.572 |