Gene detail information of Glyur001140s00032336.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06250.1 | 3.00E-17 | FAR1-related sequence 7 |
| NR | XP_007208966.1 | 5.50E-45 | hypothetical protein PRUPE_ppb019935mg [Prunus persica] |
| Swissprot | tr|Q9M8J3|FRS7_ARATH | 7.00E-18 | Protein FAR1-RELATED SEQUENCE 7 |
| trEMBL | tr|K7MC87|K7MC87_SOYBN | 6.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G20510.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01140 | 71406 | 73676 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001140s00032336.1 | PF03101.10 | FAR1 | 65 | 154 | 8.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.175 |
| SRR1811619 | moderate drought stress | 0.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.123 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.072 |
| SRR2967015 | Control (Tissue:root) | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.044 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.007 |
| SRR8749029 | MeJA induced 9h | 0.020 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.065 |
| SRR8400027 | Control-Root | 0.103 |