Gene detail

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Gene detail information of Glyur001143s00036400.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21230.1	3.00E-105	wall associated kinase 5
NR	XP_006595272.1	0	PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
COG	YP_006807242.1	9.00E-20	serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprot	tr\|Q9LMN7\|WAK5_ARATH	1.00E-121	Wall-associated receptor kinase 5 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur001143s00036400.1
ATGAAAGTGGTAGGAGCAGTAGTTGCAGCTGATGATCAAGCAGCCCCTTCTCCAGCACCAGCACTGACACCAGAACAATTAGCCCTGCCTGGCTGCCNTTCCAGTTGTGGAGATGTCCAAATTCCATACCCATTTGGCATAGACAATTCATCTACACCTGGTGATAATCAAAAACCCNGTTACTTGGAGCCCAGATTCGAACTCACTTGCGACGAGGACTCCAAATTATATCAGGATCGCTTGCGAGTCTTACACATAGACGTCCTCCAAGGTCAAATGGACGTGTCGTTTTATGTCGCACGGAGTTGCAATATTATTACAGATGGCAACAATAATCGTCCCTGGCTCACCTCTGTTGATTTTAGGATTTCAAGGAAGGAAAACAAGTTTGTGACTATTGGTTGCGACAGTGTTGGTATTCTCAATAGCTTTGTNGGCAATCACACATATTCAACAGGGTGCATAACAAGGTGTGATGGCACCGACACAAGTAGGATCGAGAATAGAACGTGTTCGGGTATAGGGTGTTGCCAGCTAGATGCTCTATTCGTGGGGATTTCGTCGCTATACTTAATATATCAGAAAAGGAAACTCATGGAACTGAAAGAGAAATTCTTCAAGCAGAATGGTGGTTACATTTTGCTACAACGACTCTCTAGAAGAGAAGACTCCTCCCAAATTGCTCAAATTTTCACAGAGGAAGAACTAAATAAGGCCACCGACAACTTTGACGAGAGCTTCATCATTGGCAGAGGAGGTTTTGGTACAGTTTTCAAAGGATTCCTAGCAAATAACAGAATCGTTGCTATCAAGAAGTCCAAAATAATAGATGCGAGCCAAAACGAGCAATTCATTAATGAGATAAACCACAAGAATGTGGTCAAACTCTTGGGGTGCTGTTTAGAGACAGAAGTTCCTCTATTGGTTTATGAATTTGTCAGCAATGGTACCCTTTATGACTTTTACACAAAGAAGTTCAACGGGATCTCAGGAAGTGAAGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCATCTGTCTCCATACCCATTATCCATAGCGATGTGAAGAGTGCCAACGTTCTCTTGGATGATACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAAACTGGTTCCCAATGATCAAATTGAAATAGCCACCGTAGTGCAAGGAACTCTTGGCTATTTAGACCCAGAGTATATGCAAACACATCAACTAACTGAGAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTGGAGCTTCTAACAGGGGAGAAACCTATTTCTTTTGATAGGCCAGAAGAAAAAAGAAGNCTTGCTATGCATTTTCTATCTTGCTTGAAAAATGATCGCATGTTNGAAGTTCTTCAAGATGGAATCTTGAACGAAGAAAATAAGCAGGAGATCAAGGAGGTTGCTGTTCTTGCAGCAAATTGCTTGAGACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATGAGGTCAATGGAAAAGCATTCTTGGATTAATACAGATGTAGAGGAGACTCGGTACTTGCTTCATGAAACATCATCATNTAGCATTTATGAAACTGGTGATAGTAGCAAACATGAATCTACTGGGTATGACAGCTTGAAAGATGGTTTACAACTTATTNTCTTGGATGATGGAAGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01143	763	4492	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001143s00036400.1	PF13947.1	GUB_WAK_bind	30	136	1.10E-20
Glyur001143s00036400.1	PF00069.20	Pkinase	248	496	8.90E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.022
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.229
DRR006524	Root Summer glycyrrhizin low producing strain	0.004
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.230
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.110

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.038
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.040

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.176
SRR9715740	Leave	0.056
SRR9715741	Leave	0.396
SRR9715739	Root	0.000
SRR9715742	Root	0.005
SRR9715743	Root	0.108

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.046
SRR8749029	MeJA induced 9h	0.035
SRR8749030	Uninduced	0.019
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.083

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.000
SRR8400027	Control-Root	0.000